Publications

* Denotes a student

1. Soluble Synthetic Multi-Porphyrin Arrays. 2. Photodynamics of Energy-Transfer Processes. J-S. Hsiao, B.P. Krueger, R.W. Wagner, J.K. Delaney, D.C. Mauzerall, G.R. Fleming, J.S.Lindsey, D.F. Bocian, and R.J. Donohoe. J. Am. Chem. Soc. 118, 11181-11193 (1996).

2. Electronic Excitation Transfer from Carotenoid to Bacteriochlorophyll in the Purple Bacterium Rhodopseudomonas acidophila. B.P. Krueger, G.D. Scholes, R. Jimenez, and G.R. Fleming. J. Phys. Chem. B. 102, 2284-2292 (1998).

3. Calculation of Couplings and Energy Transfer Pathways Between the Pigments of LH2 by the ab initio Transition Density Cube Method. B.P. Krueger, G.D. Scholes, and G.R. Fleming. J. Phys. Chem. B. 102, 5378-5386 (1998). And correction: 102, 9603 (1998).

4. Fluorescence Upconversion and ab initio Studies of the Light-Harvesting Function of Carotenoids in Bacterial Light-Harvesting Antenna. B.P. Krueger, G.D. Scholes, I.R. Gould, and G.R. Fleming. In: Ultrafast Phenomena XI, eds. T. Elsaesser, J.G. Fujimoto, D.A. Wiersma, W. Zinth, Springer-Verlag, Berlin Heidelberg, p.666-668 (1998).

5. The Light Harvesting Process in Purple Bacteria. B.P. Krueger, G.D. Scholes, J.-Y. Yu, and G.R. Fleming. Acta Physica Polonica A (Special Issue: Jablonski Centennial Conference on Luminescence and Photophysics, Torun, July 23-27, 1998), 95, 63-83 (1999).

6. Carotenoid Mediated B800-B850 Coupling in LH2. B.P. Krueger, G.D. Scholes, I.R. Gould, and G.R. Fleming. PhysChemComm. 8 (1999). http://www.rsc.org/ej/qu/1999/C9903172/index.htm.

7. Observation of the S1 State of Spheroidene in LH2 by Two-Photon Fluorescence Excitation. B.P. Krueger, J. Yom, P.J. Walla, and G.R. Fleming. Chem. Phys. Lett. 310, 57-64 (1999).

8. Ultrafast Energy Transfer in LHC-II Revealed by Three-Pulse Photon Echo Peak Shift Measurements. R. Agarwal, B.P. Krueger, G.D. Scholes, M. Yang, J. Yom, L. Mets, and G.R. Fleming. J. Phys. Chem. B. 104, 2908-2918 (2000).

9. Two-Photon Excitation Spectrum of Light-Harvesting Complex II and Fluorescence Upconversion after One- and Two-Photon Excitation of the Carotenoids. P.J. Walla, J. Yom, B.P. Krueger, and G.R. Fleming. J. Phys. Chem. B. 104, 4799-4806 (2000).

10. Energy Transfer in the Peridinin Chlorophyll-a Protein of Amphidinium carterae Studied by Polarized Transient Absorption and Target Analysis. B.P. Krueger, S.S. Lampoura, I.H.M. van Stokkum, E. Papagiannakis, J.M. Salverda, C.C. Gradinaru, D. Rutkauskas, R.G. Hiller, and R. van Grondelle. Biophys. J. 80, 2843-2855 (2001).

11. Molecular Dynamics Simulations of a Highly-Charged Peptide from an SH3 Domain: A Possible Sequence-Function Relationship. B.P. Krueger and P. A. Kollman. Proteins. 45, 4-15 (2001).

12. Energy transfer in the peridinin-chlorophyll-a-protein of Amphidinium carterae studied by polarized absorption measurements. S.S. Lampoura, B.P. Krueger, I.H.M. Van Stokkum, J.M. Salverda, C.C. Gradinaru, D. Rutkauskas, R.G. Hiller, R. Van Grondelle. Int.J.Mod.Phys. B. 15, 3849-3852 (2001).

13. Photochemistry. G. R. Fleming, J. W. Longworth, and B.P. Krueger. In: Encyclopedia Brittanica Online.

14. Energy Transfer in Light-Harvesting Complexes LHCII and CP29 of Spinach Studied with Three-Pulse Echo Peak Shift and Transient Grating. J.M. Salverda, M. Vengris, B.P. Krueger, G.D. Scholes, A.R. Czarnoleski*, V. Novoderezhkin, H. van Amerongen, and R. van Grondelle. Biophys J. 84, 450-465 (2003).

15. Energy Transfer in the Nanostar: The Role of Coulombic Coupling and Dynamics. W. Ortiz, B.P. Krueger, V.D. Kleinman, J.L. Krause, and A.E. Roitberg. J. Phys. Chem. B. 109, 11512-11519 (2005).

16. Structural Fluctuations and Excitation Transfer Between Adenine and 2-Aminopurine in Single-Stranded Deoxytrinucleotides. J.M. Jean and B.P. Krueger. J. Phys. Chem. B. 110, 2899-2909 (2006).

17. A Thermodynamic Exploration of Eosin-Lysozyme Binding: A Physical Chemistry and Biochemistry Laboratory Experiment. A.J. Huisman*, L.R. Hartsell*, M.J. Pikaart, and B.P. Krueger. submitted to J.Chem Ed.

18. Fretting about FRET: Correlation between I and R. D.B. VanBeek*, M.C. Zwier*, J.M. Shorb*, and B.P. Krueger. submitted to Biophys. J.

19. Evaluation of a Hybrid Molecular Dynamics and Quantum Mechanics Method for Simulating Solvation Dynamics. M.C. Zwier*, J.M. Shorb*, and B.P. Krueger. manuscript in preparation.

Zwier, M.C.*; Shorb, J.M.*; Krueger, B. P., Hybrid Molecular Dynamics-Quantum Mechanics Simulations of Condensed Phase Spectral Properties: Evaluation of Simulation Parameters J. Comput. Chem 28; 1572-1581 (2007)

VanBeek, D.B.*; Zwier, M.C.*; Shorb, J.M.*; Krueger, B. P. Fretting about FRET: Correlation between k and R Biophys. J 92; 4168-4178 (2007)